Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012767.1 Corchorus olitorius cultivar O-4 contig12800, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38498

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
866--970
46
2.3
46
98
0
201
45
6
4
42
1.51
1597--1676
41
1.9
42
87
10
119
30
33
20
16
1.94
4612--4641
12
2.5
12
94
0
51
13
20
13
53
1.72
14579--14677
31
3.2
31
92
2
164
20
15
33
31
1.93
18402--18432
2
16.0
2
93
6
55
51
0
0
48
1.00
18537--18592
29
1.9
29
92
0
94
21
5
30
42
1.75
18747--18776
6
5.0
6
95
0
51
20
16
63
0
1.31
25750--25809
32
1.9
32
86
3
86
61
8
16
13
1.55
26611--26660
18
2.5
21
75
15
61
26
0
16
58
1.38
26615--26659
19
2.4
19
92
3
74
26
0
15
57
1.38
33286--33320
17
2.1
17
94
0
61
31
8
17
42
1.79

Tables:   1

The End!