Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012774.1 Corchorus olitorius cultivar O-4 contig12807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19541

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4494--4542
22
2.2
22
85
7
64
42
10
20
26
1.84
4507--4670
22
7.4
21
69
16
82
39
9
12
37
1.77
14683--14721
20
2.0
19
85
5
51
38
17
12
30
1.88
16220--16329
56
1.9
56
87
5
159
41
17
17
23
1.89
19296--19376
39
2.0
40
83
6
103
48
8
6
37
1.59

Tables:   1

The End!