Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012778.1 Corchorus olitorius cultivar O-4 contig12811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20498

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
326--358
2
16.5
2
100
0
66
51
0
0
48
1.00
1267--1617
167
2.1
167
79
4
370
34
18
16
30
1.93
1797--1856
22
2.7
22
73
14
61
41
13
10
35
1.78
3444--3502
27
2.2
27
81
0
64
33
11
22
32
1.90
5540--6075
22
24.0
22
67
13
168
35
16
10
37
1.83
6849--6877
2
15.0
2
92
7
51
48
0
0
51
1.00
6973--7434
233
2.0
234
97
0
872
24
13
20
41
1.88
16377--16458
39
2.1
39
97
0
155
34
32
9
23
1.87

Tables:   1

The End!