Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012781.1 Corchorus olitorius cultivar O-4 contig12814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6960

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1100--1139
11
3.5
11
83
16
55
0
25
0
75
0.81
2060--2288
51
4.6
49
78
12
159
34
13
7
44
1.73
2061--2174
47
2.3
47
82
5
129
30
13
7
49
1.68
2153--2301
51
2.9
51
86
4
212
36
15
7
40
1.75
2311--2424
50
2.2
52
83
7
146
34
16
5
43
1.71
3823--3859
16
2.3
16
90
0
56
43
24
24
8
1.81
5108--5134
2
13.5
2
100
0
54
48
0
0
51
1.00
6118--6142
13
1.9
13
100
0
50
56
0
0
44
0.99

Tables:   1

The End!