Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012789.1 Corchorus olitorius cultivar O-4 contig12822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2063

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1419--1625
25
8.3
25
68
19
94
25
9
0
65
1.26
1431--1552
59
2.1
58
82
11
153
25
9
0
64
1.24
1417--1590
82
2.1
84
88
7
257
24
10
0
65
1.23
1413--1622
44
4.8
44
79
12
220
24
9
0
65
1.26
1518--1628
27
4.2
27
69
17
81
25
8
0
65
1.25
1589--1631
19
2.3
19
83
0
59
27
2
2
67
1.15
1431--1628
4
50.0
4
65
18
76
25
8
0
65
1.25
1698--1732
14
2.5
14
86
13
54
25
5
0
68
1.11

Tables:   1

The End!