Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012793.1 Corchorus olitorius cultivar O-4 contig12826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31079

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2589--2628
21
1.9
21
90
10
64
15
45
30
10
1.78
6446--6487
19
2.2
20
86
4
59
21
0
7
71
1.09
7172--7197
5
5.2
5
100
0
52
61
0
0
38
0.96
12435--12488
19
2.6
21
77
19
60
38
3
18
38
1.69
18758--18812
24
2.3
24
75
6
58
25
7
1
65
1.28
20723--20756
15
2.2
16
89
5
52
44
2
5
47
1.42
26535--26563
14
2.0
15
93
6
51
75
3
13
6
1.13

Tables:   1

The End!