Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012800.1 Corchorus olitorius cultivar O-4 contig12833, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9609

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2209--2854
315
2.0
319
93
1
1129
34
18
10
37
1.84
3770--3817
18
2.9
16
84
9
62
70
4
16
8
1.27
4287--4332
17
2.8
17
75
15
51
23
2
13
60
1.43
5928--5996
31
2.3
31
82
7
81
34
17
23
24
1.96
7480--7546
21
3.2
21
66
16
57
49
17
5
26
1.70
7467--7547
42
1.9
42
97
0
153
45
18
7
28
1.76
8055--8148
45
2.2
43
90
7
147
38
22
5
34
1.77

Tables:   1

The End!