Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012804.1 Corchorus olitorius cultivar O-4 contig12837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5372

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--290
50
5.8
50
95
0
490
27
12
28
31
1.93
815--937
50
2.5
50
87
2
167
36
14
16
32
1.89
1942--1989
15
3.2
15
77
11
62
12
10
0
77
1.00
3041--3124
42
2.0
42
85
0
114
41
11
22
23
1.87
3065--3159
42
2.3
42
87
8
133
41
10
24
24
1.86

Tables:   1

The End!