Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012805.1 Corchorus olitorius cultivar O-4 contig12838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33941

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--129
22
2.3
22
96
0
91
52
18
16
14
1.76
963--1021
28
2.1
28
100
0
118
35
11
13
38
1.82
10207--10246
20
1.9
22
90
10
66
67
7
20
5
1.34
19838--19908
22
3.2
21
67
15
54
42
16
5
35
1.72
33898--33940
2
21.5
2
100
0
86
48
0
0
51
1.00

Tables:   1

The End!