Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012806.1 Corchorus olitorius cultivar O-4 contig12839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7358

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1879--1904
3
8.7
3
100
0
52
69
0
30
0
0.89
1907--1974
35
1.9
36
90
3
111
36
4
42
16
1.68
2226--2250
9
2.8
9
100
0
50
88
0
12
0
0.53
2988--3016
10
2.9
10
100
0
58
31
27
0
41
1.56
4684--4855
31
5.5
31
84
2
211
16
23
27
32
1.96

Tables:   1

The End!