Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012811.1 Corchorus olitorius cultivar O-4 contig12844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11151

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2505--2633
45
2.9
45
89
0
204
34
6
21
37
1.79
3574--3617
23
1.9
23
81
9
54
45
6
0
47
1.29
3672--3733
31
2.0
31
96
0
115
30
22
3
43
1.69
3828--3866
14
2.8
14
88
7
53
23
10
2
64
1.37
3759--3937
85
2.1
85
90
2
279
32
12
2
52
1.51
5517--5564
16
3.1
16
72
22
57
60
4
2
33
1.27
5517--5561
14
2.9
16
72
24
51
60
4
2
33
1.29
5869--5927
31
1.9
31
82
6
75
11
18
37
32
1.87
8495--8746
130
1.9
131
91
0
416
37
9
1
50
1.45
9821--9881
30
2.0
30
100
0
122
27
22
13
36
1.92
10805--10843
20
1.9
21
89
5
62
76
0
17
5
0.96

Tables:   1

The End!