Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012812.1 Corchorus olitorius cultivar O-4 contig12845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9371

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
814--866
11
4.3
12
81
15
56
62
7
1
28
1.33
814--857
13
3.5
13
84
15
65
61
9
0
29
1.27
814--866
24
2.2
25
89
3
81
62
7
1
28
1.33
6366--6446
42
1.9
42
92
0
135
27
7
17
48
1.73
7172--7208
13
2.8
13
95
0
65
45
0
13
40
1.43
7634--8188
198
2.8
198
88
3
821
34
17
13
34
1.88

Tables:   1

The End!