Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012814.1 Corchorus olitorius cultivar O-4 contig12847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10947

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2152--2215
33
2.0
33
84
9
87
15
17
20
46
1.83
2699--2743
22
2.0
22
100
0
90
13
22
17
46
1.83
6540--6611
36
2.0
36
91
5
119
27
16
25
30
1.97
7083--7122
20
2.0
20
100
0
80
40
0
15
45
1.46
8526--8632
55
1.9
55
96
3
198
35
24
1
38
1.66

Tables:   1

The End!