Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012815.1 Corchorus olitorius cultivar O-4 contig12848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10705

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1024--1070
3
15.7
3
84
0
58
36
6
0
57
1.24
7128--7181
25
2.2
25
82
0
63
18
25
29
25
1.98
7135--7184
25
2.0
25
88
0
73
20
24
26
30
1.98
8577--8654
15
4.7
18
72
18
87
21
10
28
39
1.86
8584--8669
15
5.3
15
75
15
73
19
10
26
43
1.84
8568--8669
33
3.1
33
92
0
159
19
12
26
41
1.87
10314--10607
43
6.7
42
82
12
358
40
26
10
21
1.86
10670--10705
2
18.5
2
94
5
65
47
0
0
52
1.00

Tables:   1

The End!