Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012826.1 Corchorus olitorius cultivar O-4 contig12859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9344

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
662--720
31
1.9
31
82
6
75
11
18
37
32
1.87
902--942
21
1.9
22
85
5
57
9
17
29
43
1.80
5121--5178
30
2.0
29
87
9
84
24
12
32
31
1.91
8358--8442
36
2.4
36
97
0
161
29
27
22
21
1.99
8394--8493
50
2.0
50
96
0
182
30
27
20
23
1.98

Tables:   1

The End!