Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012828.1 Corchorus olitorius cultivar O-4 contig12861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31827

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24892--24925
12
2.8
12
87
12
52
26
38
0
35
1.57
24962--25011
21
2.4
21
86
0
64
22
40
4
34
1.72
25522--25558
16
2.3
16
100
0
74
37
27
16
18
1.92
25540--25590
24
2.1
25
92
3
86
43
29
11
15
1.82
25540--25600
24
2.4
25
86
8
70
45
31
9
13
1.75

Tables:   1

The End!