Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012831.1 Corchorus olitorius cultivar O-4 contig12864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24647

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2912--2956
15
3.3
14
87
9
58
40
15
6
37
1.74
11643--11716
27
2.7
27
85
0
103
37
28
18
14
1.91
16003--16042
19
2.2
18
86
4
53
27
20
5
47
1.70
21282--21326
22
2.0
22
91
0
72
40
8
33
17
1.81

Tables:   1

The End!