Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012837.1 Corchorus olitorius cultivar O-4 contig12870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70280

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1378--1410
17
1.9
17
93
0
57
39
21
21
18
1.93
7110--7746
318
2.0
318
99
0
1256
25
15
15
43
1.86
8505--8567
29
2.2
29
82
0
72
12
7
33
46
1.71
14378--14406
14
2.1
14
100
0
58
13
20
13
51
1.75
20118--20171
21
2.5
21
81
3
63
59
31
1
7
1.36
28752--28784
17
1.9
17
88
11
50
21
6
27
45
1.75
45643--45672
15
2.0
15
93
0
51
83
0
16
0
0.65
51427--51472
23
2.0
23
95
0
83
36
4
50
8
1.53
58235--58288
19
2.6
21
77
19
60
38
18
3
38
1.69
64570--64700
65
2.0
65
98
0
253
16
25
3
54
1.56
64844--64916
33
2.2
33
92
2
121
20
30
2
46
1.65

Tables:   1

The End!