Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012838.1 Corchorus olitorius cultivar O-4 contig12871, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25477

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11555--11589
11
3.2
11
83
0
52
77
17
5
0
0.96
11560--11618
16
3.7
16
72
17
50
69
18
10
1
1.25
14360--14386
7
3.9
7
100
0
54
0
11
0
88
0.50
14888--14933
12
3.8
12
88
5
74
23
30
10
34
1.89
14885--14934
25
2.0
25
100
0
100
24
28
12
36
1.91
18492--18529
18
2.1
18
85
9
51
65
7
18
7
1.43

Tables:   1

The End!