Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012840.1 Corchorus olitorius cultivar O-4 contig12873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13557

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3113--3166
4
13.5
4
76
0
54
50
24
24
1
1.60
3294--3342
18
2.7
18
93
0
80
10
34
30
24
1.89
4757--4781
2
12.5
2
100
0
50
52
0
0
48
1.00
5909--5944
19
1.9
18
88
5
54
41
8
22
27
1.82
7274--7316
22
2.0
22
81
9
52
16
9
11
62
1.53

Tables:   1

The End!