Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012847.1 Corchorus olitorius cultivar O-4 contig12880, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23981

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--905
319
2.8
319
83
6
1089
32
14
17
34
1.91
6729--6759
16
1.9
16
93
0
53
83
3
0
12
0.75
17022--17283
107
2.5
105
91
2
420
41
8
8
41
1.66
17493--17551
29
2.0
29
100
0
118
30
20
11
37
1.89
18931--19070
3
47.0
3
97
1
264
32
0
0
66
0.97
19999--20170
88
2.0
88
83
4
222
35
11
17
35
1.86

Tables:   1

The End!