Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012851.1 Corchorus olitorius cultivar O-4 contig12884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47050

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--453
51
2.0
51
98
0
199
42
9
8
39
1.68
2278--2319
14
3.1
14
72
6
50
59
2
2
35
1.23
2307--2556
121
2.0
127
88
7
377
50
1
10
38
1.45
4798--4843
23
2.0
23
86
4
65
52
10
13
23
1.71
28179--28212
16
2.1
17
94
5
61
0
11
2
85
0.71
31165--31264
31
3.4
31
73
16
122
35
4
14
47
1.62
31160--31273
56
2.0
56
100
0
228
34
3
14
48
1.60
31263--31306
22
2.0
22
95
0
79
15
2
18
63
1.41

Tables:   1

The End!