Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012852.1 Corchorus olitorius cultivar O-4 contig12885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20347

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--55
2
25.0
2
100
0
100
50
0
0
50
1.00
408--452
21
2.1
21
83
0
54
35
8
22
33
1.85
12793--16302
332
10.6
331
79
6
3467
36
15
14
33
1.88
14969--16302
333
4.0
328
81
6
1429
36
14
14
33
1.88
17012--17065
3
18.0
3
100
0
108
66
0
0
33
0.92
17058--17109
15
3.3
15
85
15
70
48
0
13
38
1.43
17055--17109
17
3.3
17
85
9
78
49
0
12
38
1.41
17896--17935
19
2.0
21
85
9
57
60
5
10
25
1.49

Tables:   1

The End!