Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012853.1 Corchorus olitorius cultivar O-4 contig12886, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9577

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
723--752
15
1.9
16
93
6
53
43
0
3
53
1.17
1108--2108
332
3.0
325
80
5
1085
34
14
14
36
1.87
2348--3052
330
2.1
330
81
4
823
33
13
15
37
1.87
3156--4803
335
5.0
332
80
6
1670
32
14
15
37
1.88
7899--7954
25
2.2
26
81
9
71
41
0
1
57
1.09
8301--9280
320
3.0
317
76
13
840
32
15
16
36
1.90
9318--9410
16
5.9
16
70
9
75
8
13
37
39
1.76
9330--9410
32
2.5
32
85
0
117
8
14
37
39
1.77
9414--9458
17
2.6
17
92
0
72
2
22
48
26
1.62

Tables:   1

The End!