Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012856.1 Corchorus olitorius cultivar O-4 contig12889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8601

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
818--903
32
2.8
31
82
6
113
51
9
18
20
1.74
3712--3749
15
2.5
15
87
8
51
47
10
13
28
1.76
4042--4066
12
2.1
12
100
0
50
60
16
0
24
1.36
6116--6578
64
7.2
64
85
1
559
34
15
22
27
1.94
6116--6578
129
3.6
128
84
3
581
34
15
22
27
1.94
6107--6548
194
2.3
193
88
2
638
35
15
21
26
1.94
8430--8601
65
2.6
66
81
4
215
36
15
22
25
1.93

Tables:   1

The End!