Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012858.1 Corchorus olitorius cultivar O-4 contig12891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8196

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2540--2587
23
2.1
23
92
0
78
47
22
12
16
1.80
3441--3488
15
3.1
15
75
16
53
8
20
35
35
1.83
5272--5301
12
2.4
12
94
5
51
70
20
0
10
1.16
5422--5499
30
2.6
30
97
0
147
29
12
11
46
1.77
5497--5553
28
2.0
28
86
0
78
49
3
5
42
1.42
7283--7343
27
2.3
27
82
0
68
34
9
22
32
1.87

Tables:   1

The End!