Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012861.1 Corchorus olitorius cultivar O-4 contig12894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11325

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346--387
15
2.7
15
96
3
75
11
7
14
66
1.43
5151--5319
83
2.0
84
95
2
304
30
10
19
39
1.86
6137--6217
22
3.7
22
80
1
92
41
12
7
38
1.71
6141--6239
43
2.3
44
87
1
137
42
13
8
36
1.73
6157--6293
22
6.3
22
73
11
104
39
14
7
38
1.74
7913--7982
35
2.0
35
100
0
140
40
17
5
37
1.73

Tables:   1

The End!