Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012865.1 Corchorus olitorius cultivar O-4 contig12898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18672

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1802--1837
19
1.9
18
88
5
54
75
0
16
8
1.04
2763--2811
19
2.9
16
75
18
55
63
10
10
16
1.52
2777--2813
19
1.9
19
88
0
56
62
10
10
16
1.55
8077--8126
19
2.5
20
83
6
66
26
46
20
8
1.78
8874--8917
22
2.0
22
82
13
54
22
4
11
61
1.48
11503--11539
2
18.5
2
94
0
65
45
0
2
51
1.15
11806--11993
22
8.4
22
73
13
143
21
20
14
43
1.88

Tables:   1

The End!