Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012868.1 Corchorus olitorius cultivar O-4 contig12901, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10042

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3660--4004
43
8.0
43
85
3
469
20
24
18
36
1.95
4070--4301
40
5.8
40
78
5
229
15
24
21
37
1.93
4079--4480
40
9.6
40
71
12
204
14
24
20
39
1.90
4265--4507
48
5.4
47
66
19
167
11
25
19
43
1.84
4232--4507
88
3.1
88
95
2
500
11
25
19
42
1.85
6439--6474
16
2.2
17
90
5
56
33
19
0
47
1.50

Tables:   1

The End!