Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012869.1 Corchorus olitorius cultivar O-4 contig12902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40486

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1664--1771
53
2.0
53
100
0
216
29
13
12
43
1.82
13854--13887
9
3.8
9
92
0
59
32
5
0
61
1.20
13854--13888
3
11.7
3
87
0
52
31
5
0
62
1.18
13846--13891
18
2.4
19
89
10
76
30
4
0
65
1.12
14177--14201
3
8.3
3
100
0
50
68
0
0
32
0.90
26187--26225
16
2.4
16
87
8
53
64
12
7
15
1.49
32321--32357
18
2.1
18
89
0
56
45
8
8
37
1.63
35423--35500
27
2.9
27
88
0
129
38
24
19
17
1.93

Tables:   1

The End!