Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012875.1 Corchorus olitorius cultivar O-4 contig12908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14729

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
473--498
9
2.9
9
100
0
52
80
19
0
0
0.71
4962--5051
46
2.0
46
97
0
171
40
8
27
23
1.84
5295--5503
52
4.1
52
97
2
390
27
26
11
33
1.91
5294--5503
102
2.1
102
95
4
388
27
26
11
34
1.91
7011--7048
15
2.4
17
83
16
55
15
0
21
63
1.31
7011--7049
16
2.6
14
88
12
51
17
0
20
61
1.34
9433--9495
23
2.7
23
87
7
83
42
9
14
33
1.78
13097--13126
15
2.1
14
93
6
51
13
16
6
63
1.50

Tables:   1

The End!