Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012882.1 Corchorus olitorius cultivar O-4 contig12915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25159

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
820--862
22
2.0
22
100
0
86
23
18
9
48
1.76
913--1236
161
2.0
161
98
0
630
42
10
10
37
1.73
3917--3955
20
2.0
20
84
0
51
7
12
12
66
1.43
5655--5697
20
2.2
20
91
8
70
41
4
23
30
1.74
6877--6909
17
1.9
17
100
0
66
54
0
9
36
1.32
6874--6913
17
2.5
15
85
14
62
52
0
7
40
1.30
9087--9405
120
2.8
113
83
6
385
38
11
28
21
1.88
20439--20582
49
3.0
47
82
8
168
50
5
15
28
1.66
23431--23559
49
2.7
47
87
8
179
49
6
14
29
1.68
24844--24881
9
4.3
9
90
3
60
31
21
0
47
1.51
24844--24881
18
2.2
18
95
4
69
31
21
0
47
1.51

Tables:   1

The End!