Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012885.1 Corchorus olitorius cultivar O-4 contig12918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20311

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8219--8254
18
2.0
18
88
0
54
47
5
11
36
1.63
9103--9138
19
1.9
18
88
5
54
41
5
22
30
1.76
10207--10281
24
3.2
24
61
21
59
48
4
17
30
1.66
10189--10297
46
2.4
46
95
0
200
44
10
19
25
1.81
16823--16952
28
4.6
28
88
5
165
18
17
26
36
1.93
16821--16946
56
2.2
57
87
5
184
19
17
26
36
1.94
17300--17370
35
2.0
35
94
0
124
15
12
14
57
1.65
17517--17568
25
2.1
25
85
7
70
21
26
7
44
1.79
18453--18500
22
2.2
22
96
0
87
35
25
27
12
1.92
18895--18956
27
2.3
27
100
0
124
12
40
9
37
1.77

Tables:   1

The End!