Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012892.1 Corchorus olitorius cultivar O-4 contig12925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9057

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--495
27
2.6
27
86
0
88
39
26
16
16
1.91
795--999
50
4.0
51
91
4
331
26
26
12
34
1.92
796--1006
102
2.1
103
92
5
365
27
26
11
34
1.91
797--1008
52
4.1
52
92
4
358
28
25
11
33
1.91
1064--1453
50
7.8
50
94
0
681
27
12
27
31
1.93
1536--1828
91
3.3
90
89
4
405
37
13
18
30
1.90
1866--1924
25
2.3
25
81
16
68
6
22
13
57
1.59
2247--2441
50
3.9
50
92
0
327
34
15
18
31
1.92
3029--3073
7
6.6
7
89
5
58
13
2
13
71
1.25
3443--3482
14
2.7
14
88
7
53
17
15
0
67
1.23

Tables:   1

The End!