Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012897.1 Corchorus olitorius cultivar O-4 contig12930, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32361

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3567--3652
28
3.1
27
90
5
120
13
12
25
47
1.79
5190--5217
2
14.0
2
100
0
56
0
50
0
50
1.00
8038--8116
32
2.5
32
91
0
131
29
22
22
25
1.99
8359--8397
20
1.9
21
84
5
53
25
10
23
41
1.86
13363--13387
13
1.9
13
100
0
50
28
0
0
72
0.86
23806--23837
16
2.0
16
93
0
55
34
6
0
59
1.23
26282--26324
21
2.0
22
86
4
61
30
25
34
9
1.87

Tables:   1

The End!