Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012912.1 Corchorus olitorius cultivar O-4 contig12945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5594

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
649--723
28
2.7
28
74
13
75
25
22
14
37
1.92
1134--1177
13
3.5
13
84
15
65
29
0
9
61
1.27
4623--4665
15
2.8
16
86
6
54
0
25
0
74
0.82
4638--4699
21
3.1
21
75
17
60
3
22
0
74
0.96
4642--4693
13
3.9
13
85
5
68
3
21
0
75
0.97
4632--4700
27
2.6
27
80
13
74
2
23
0
73
0.96
4642--4705
14
4.5
15
81
13
57
3
21
0
75
0.95

Tables:   1

The End!