Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012914.1 Corchorus olitorius cultivar O-4 contig12947, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24260

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8073--8169
45
2.2
45
83
1
115
37
6
19
37
1.77
10055--10083
2
15.0
2
92
7
51
51
0
0
48
1.00
10328--10617
144
2.0
144
99
0
571
31
13
28
26
1.94
10617--10650
3
11.3
3
100
0
68
35
0
0
64
0.94
14944--15014
25
2.9
24
91
4
106
29
18
43
8
1.79
17254--17363
54
2.1
51
83
5
130
38
9
2
50
1.49
21552--21597
24
1.9
24
91
8
76
47
0
26
26
1.52
23087--23117
13
2.4
13
94
0
53
32
0
12
54
1.38

Tables:   1

The End!