Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012924.1 Corchorus olitorius cultivar O-4 contig12957, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45381

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3506--4079
289
2.0
289
100
0
1148
31
17
14
35
1.91
6857--6892
19
1.9
18
88
5
54
27
22
8
41
1.82
15784--15815
15
2.0
17
88
11
50
6
15
9
68
1.36
16064--16114
19
2.7
19
77
14
61
47
0
1
50
1.12
28254--28279
13
2.0
13
100
0
52
15
0
30
53
1.42
28292--28383
46
2.0
46
91
0
148
28
14
26
31
1.94
30080--30185
51
2.1
50
82
8
126
21
22
13
42
1.87
42947--42995
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!