Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012940.1 Corchorus olitorius cultivar O-4 contig12973, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11300

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--61
15
3.3
15
84
10
68
36
5
7
50
1.55
21--57
17
2.2
17
100
0
74
27
5
5
62
1.39
499--527
8
3.8
8
95
4
51
93
0
6
0
0.36
499--532
16
2.1
17
88
5
52
88
0
11
0
0.52
500--530
14
2.1
15
94
5
55
90
0
9
0
0.46
3467--3519
26
2.0
26
88
0
79
33
24
22
18
1.97
5375--5420
18
2.6
18
78
0
56
52
2
0
45
1.13
5682--5754
27
2.7
28
78
6
87
27
27
12
32
1.92
7528--7562
11
3.2
11
91
0
61
80
17
2
0
0.84
10226--10250
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!