Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012942.1 Corchorus olitorius cultivar O-4 contig12975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5326

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88--528
218
2.0
221
95
1
798
38
9
7
45
1.65
2838--2909
18
4.0
18
87
0
99
30
12
30
26
1.93
2838--2909
36
2.0
36
91
0
117
30
12
30
26
1.93
2840--2927
36
2.4
36
84
3
106
31
11
28
28
1.91
3088--3176
18
4.9
18
76
15
94
29
28
13
29
1.94
3096--3176
36
2.2
36
85
8
119
28
28
12
30
1.93

Tables:   1

The End!