Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012954.1 Corchorus olitorius cultivar O-4 contig12987, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18826

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1353--1417
24
2.7
24
88
4
87
49
0
47
3
1.17
2587--2632
24
1.9
24
100
0
92
34
15
30
19
1.93
4821--4888
21
3.2
21
64
15
59
50
14
5
29
1.67
4808--4887
42
1.9
42
94
0
142
48
15
6
30
1.69
4906--5123
108
2.0
108
98
0
418
41
4
14
39
1.67
5062--5175
56
2.0
56
94
0
201
40
1
21
35
1.64
10842--10887
7
7.0
7
92
5
62
67
32
0
0
0.91
10851--10885
6
5.7
6
93
6
61
71
28
0
0
0.86
10842--10885
13
3.4
13
90
9
72
68
31
0
0
0.90
18431--18491
31
2.0
31
83
6
79
36
40
16
6
1.74
18471--18513
16
2.8
15
77
19
52
32
34
23
9
1.87

Tables:   1

The End!