Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012969.1 Corchorus olitorius cultivar O-4 contig13002, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16841

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
849--885
18
2.1
18
90
10
58
56
5
10
27
1.55
4375--4414
21
1.9
21
94
0
71
35
25
5
35
1.78
5133--5215
30
2.8
30
88
1
132
21
25
10
42
1.85
5295--5403
31
3.6
30
82
6
123
15
21
20
43
1.88
5320--5405
30
2.9
30
87
5
104
13
24
19
41
1.88
5470--5530
29
2.1
30
90
3
97
40
14
24
19
1.89
6087--6114
10
2.8
10
100
0
56
42
21
7
28
1.79
7240--7277
13
3.0
13
84
3
51
26
26
15
31
1.96
9076--9129
19
2.6
21
77
19
60
38
18
3
38
1.69

Tables:   1

The End!