Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012977.1 Corchorus olitorius cultivar O-4 contig13010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23623

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3007--3048
20
2.1
20
86
0
57
66
7
19
7
1.39
3643--3678
19
1.9
18
88
5
54
27
22
8
41
1.82
6080--6253
50
3.5
50
91
0
267
35
10
29
24
1.90
6475--6593
28
4.2
28
84
0
139
17
13
24
44
1.85
14737--14786
21
2.4
21
93
0
82
30
16
28
26
1.96
18537--18576
6
6.7
6
82
0
53
5
12
0
82
0.82
18531--18576
12
3.8
12
88
0
65
8
10
0
80
0.91
18738--18777
16
2.6
14
88
11
53
12
10
20
57
1.63
19439--19475
18
2.1
18
89
0
56
45
5
10
37
1.62

Tables:   1

The End!