Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012982.1 Corchorus olitorius cultivar O-4 contig13015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5062

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
309--348
19
2.1
19
100
0
80
70
5
20
5
1.26
2436--2563
35
3.6
35
77
5
105
10
10
24
54
1.66
2449--2508
16
3.4
18
75
11
61
8
13
25
53
1.67
2470--2568
17
5.6
17
70
16
58
11
8
24
56
1.61
2905--2957
25
2.1
25
96
0
97
41
1
22
33
1.65
4020--4077
27
2.1
27
100
0
116
25
15
18
39
1.91

Tables:   1

The End!