Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012984.1 Corchorus olitorius cultivar O-4 contig13017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39472

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
647--681
18
2.0
18
88
5
54
17
17
17
48
1.81
2978--3050
19
3.8
18
82
12
83
39
9
2
47
1.50
2977--3042
20
3.4
19
83
10
80
34
10
1
53
1.45
9639--9699
29
2.1
30
87
3
88
50
3
3
42
1.34
11399--11444
22
2.1
22
100
0
92
17
36
4
41
1.69
23989--24022
2
17.0
2
100
0
68
50
0
50
0
1.00
39086--39165
29
2.7
30
84
3
99
30
16
12
41
1.85
39293--39386
31
3.0
31
90
1
143
46
10
12
29
1.76

Tables:   1

The End!