Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012990.1 Corchorus olitorius cultivar O-4 contig13023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39387

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
100
0
76
50
0
0
50
1.00
4841--5146
152
2.0
153
95
0
551
23
17
20
38
1.93
7560--7612
20
2.7
20
88
5
72
3
1
15
79
0.96
7560--7608
6
7.7
6
84
11
62
4
2
14
79
0.97
16072--16097
13
2.0
13
100
0
52
53
0
15
30
1.42
20310--20339
9
3.4
9
95
4
53
6
33
0
60
1.23
20692--20750
24
2.5
24
100
0
118
8
8
8
74
1.22
21329--21376
22
2.2
23
85
7
64
47
2
2
47
1.25
24024--24180
31
5.3
31
66
18
93
25
17
18
38
1.93
24053--24151
29
3.4
27
70
17
83
25
17
20
37
1.93
24024--24180
58
2.7
60
90
4
239
25
17
18
38
1.93
31721--31764
3
15.0
3
90
4
72
34
0
2
63
1.07
35005--35115
32
3.5
32
84
0
159
47
10
15
26
1.78
35081--35274
81
2.5
76
82
8
225
45
8
18
27
1.78
35153--35221
30
2.2
32
87
5
97
49
4
20
26
1.67

Tables:   1

The End!