Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012992.1 Corchorus olitorius cultivar O-4 contig13025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11244

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
669--1075
204
2.0
202
93
2
692
43
8
11
36
1.71
1480--1526
6
7.7
6
97
2
85
48
0
14
36
1.44
2576--2623
21
2.3
22
79
17
57
6
20
6
66
1.36
7286--7340
6
9.5
6
90
7
87
87
12
0
0
0.55
7287--7340
11
4.8
11
88
4
81
87
12
0
0
0.56
7287--7340
17
3.2
17
97
0
99
87
12
0
0
0.56
7286--7340
23
2.4
23
93
3
94
87
12
0
0
0.55
8131--8231
44
2.3
44
84
0
130
38
12
15
32
1.86
8107--8344
22
10.9
22
68
13
100
39
10
19
30
1.86
8362--8605
22
11.1
22
74
11
135
31
11
17
40
1.84
8738--9048
168
1.8
169
82
6
398
31
17
19
32
1.95
10324--10866
22
24.4
22
66
14
159
37
11
15
35
1.83
10757--10881
44
2.8
45
78
3
137
30
12
20
36
1.90
10764--10887
22
5.6
22
77
8
99
29
12
20
38
1.88

Tables:   1

The End!