Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012993.1 Corchorus olitorius cultivar O-4 contig13026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33717

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
373--410
18
2.1
19
90
5
60
39
15
2
42
1.61
9401--9508
32
3.3
32
64
15
78
34
12
17
35
1.88
10136--10209
31
2.5
31
82
4
89
18
24
22
33
1.97
10483--10537
29
1.9
28
82
10
67
12
7
7
72
1.26
15045--15073
2
14.5
2
100
0
58
0
0
48
51
1.00
18837--18865
14
2.1
14
100
0
58
34
31
13
20
1.92
19667--19747
33
2.6
31
86
13
114
55
2
11
30
1.48
21055--21083
3
9.7
3
100
0
58
34
0
0
65
0.93
21084--21120
17
2.1
18
90
5
58
54
35
2
8
1.44
25198--25240
20
2.1
20
82
4
50
44
4
2
48
1.36
25353--25408
11
5.1
11
82
8
78
58
17
10
12
1.61
32284--32750
115
4.2
110
86
5
583
29
12
21
36
1.90
32284--32746
222
2.1
214
83
9
590
29
12
20
36
1.90
32784--33025
120
2.0
120
88
3
362
14
38
2
44
1.59

Tables:   1

The End!