Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012995.1 Corchorus olitorius cultivar O-4 contig13028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21591

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3415--3464
25
2.0
25
96
0
91
38
14
20
28
1.91
3600--3819
28
7.8
28
83
6
264
38
24
17
19
1.93
3601--3817
57
3.8
56
85
4
292
38
23
17
19
1.93
8107--8150
22
2.0
22
90
0
70
18
20
38
22
1.93
10871--10910
14
2.9
14
96
0
71
40
0
45
15
1.46
12633--12722
27
3.3
27
86
6
112
38
24
18
17
1.92
12661--12730
27
2.6
27
93
0
113
37
24
18
20
1.94
20981--21188
107
1.9
107
92
0
344
40
10
9
39
1.71

Tables:   1

The End!