Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013004.1 Corchorus olitorius cultivar O-4 contig13037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7912

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2959--3021
27
2.3
27
81
10
67
44
9
22
23
1.82
3001--4369
40
33.9
40
80
8
1039
37
10
21
30
1.87
3872--3910
13
3.2
13
78
14
55
46
7
12
33
1.71
4490--4927
144
3.0
145
93
1
736
34
14
20
29
1.92
5943--5982
13
3.0
13
92
3
62
7
17
5
70
1.30
5938--5976
13
2.8
14
92
7
62
5
20
5
69
1.28
5943--5982
14
2.9
14
92
3
64
7
17
5
70
1.30
6287--6345
25
2.4
25
82
0
64
5
13
8
72
1.24
6299--6354
25
2.2
26
83
3
69
0
10
10
78
0.96
6324--6358
18
1.9
18
94
0
61
0
2
14
82
0.77

Tables:   1

The End!